Biodegradation of weathered polystyrene films in seawater microcosms
Jambeck, J. R. et al. Plastic waste inputs from land into the ocean. Science (80-.).
347, 768–771 (2015).
Avio, C. G., Gorbi, S. & Regoli, F. Plastics and microplastics in the oceans: From emerging pollutants to emerged threat. Mar. Environ. Res. 1–10, http://dx.doi.org/10.1016/j.marenvres.2016.05.012 (2016).
Eriksen, M. et al. Plastic Pollution in the World’s Oceans: More than 5 Trillion Plastic Pieces Weighing over 250,000 Tons Afloat at Sea. PLoS One
9, 1–15 (2014).
Law, K. L. Plastic Accumulation in the North Atlantic Subtropical Gyre. Science (80-.).
329, 1185–1188 (2010).
Cózar, A. et al. Plastic accumulation in the mediterranean sea. PLoS One
10, 1–12 (2015).
Ruiz-Orejon, L. F., Sarda, R. & Ramis-Pujol, J. Floating plastic debris in the Central and Western Mediterranean Sea. Mar. Environ. Res.
120, 136–144 (2016).
Pedrotti, M. L. et al. Changes in the Floating Plastic Pollution of the Mediterranean Sea in Relation to the Distance to Land. PLoS One
11, e0161581 (2016).
Liubartseva, S., Coppini, G., Lecci, R. & Creti, S. Regional approach to modeling the transport of floating plastic debris in the Adriatic Sea. Mar. Pollut. Bull.
103, 115–127 (2016).
Li, W. C., Tse, H. F. & Fok, L. Plastic waste in the marine environment: A review of sources, occurrence and effects. Sci. Total Environ.
566–567, 333–349 (2016).
Plastics Europe. Plastics – the Facts 2014/2015. An Analysis of European Plas- tics Production, Demand and Waste Data. Plastics 2015, http://dx.doi.org/10.1016/j.marpolbul.2013.01.015 (2015).
Lobelle, D. & Cunliffe, M. Early microbial biofilm formation on marine plastic debris. Mar. Pollut. Bull.
62, 197–200 (2011).
Harrison, J. P., Schratzberger, M., Sapp, M. & Osborn, A. M. Rapid bacterial colonization of low-density polyethylene microplastics in coastal sediment microcosms. BMC Microbiol.
14, 232 (2014).
Zettler, E. R., Mincer, T. J. & Amaral-Zettler, A. L. Life in the ‘Plastisphere’: Microbial communities on plastic marine debris. Environ. Sci. Technol.
47, 7137–7146 (2013).
Bryant, J. A. et al. Diversity and Activity of Communities Inhabiting Plastic Debris in the North Pacific Gyre. mSystems
1, e00024–16 (2016).
Oberbeckmann, S., Loeder, M. G. J., Gerdts, G. & Osborn, A. M. Spatial and seasonal variation in diversity and structure of microbial biofilms on marine plastics in Northern European waters. FEMS Microbiol. Ecol.
49, 478–492 (2014).
Eich, A., Mildenberger, T., Laforsch, C. & Weber, M. Biofilm and diatom succession on polyethylene (PE) and biodegradable plastic bags in two marine habitats: Early signs of degradation in the pelagic and benthic zone? PLoS One
10, 1–16 (2015).
Oberbeckmann, S., Osborn, A. M. & Duhaime, M. B. Microbes on a bottle: Substrate, season and geography influence community composition of microbes colonizing marine plastic debris. PLoS One
11, 1–24 (2016).
Harrison, J. P., Sapp, M., Schratzberger, M. & Osborn, A. M. Interactions Between Microorganisms and Marine Microplastics: A Call for Research. Mar. Technol. Soc. J.
45, 12–20 (2011).
Gilan, I. O., Hadar, Y. & Sivan, A. Colonization, biofilm formation and biodegradation of polyethylene by a strain of Rhodococcus ruber. Appl. Microbiol. Biotechnol.
65, 97–104 (2004).
Lucas, N. et al. Polymer biodegradation: Mechanisms and estimation techniques – A review. Chemosphere
73, 429–442 (2008).
Reisser, J. et al. Millimeter-sized marine plastics: A new pelagic habitat for microorganisms and invertebrates. PLoS One
9, 1–11 (2014).
Kowalczyk, A., Chyc, M., Ryszka, P. & Latowski, D. Achromobacter xylosoxidans as a new microorganism strain colonizing high-density polyethylene as a key step to its biodegradation. Environ. Sci. Pollut. Res. 1–8, http://dx.doi.org/10.1007/s11356-016-6563-y (2016).
Artham, T. et al. Biofouling and stability of synthetic polymers in sea water. Int. Biodeterior. Biodegradation
63, 884–890 (2009).
Restrepo-Flórez, J. M., Bassi, A. & Thompson, M. R. Microbial degradation and deterioration of polyethylene – A review. Int. Biodeterior. Biodegrad.
88, 83–90 (2014).
Yoshida, S. et al. A bacterium that degrades and assimilates poly(ethyleneterephthalate). Science (80-.).
351, 1196–1199 (2016).
Tian, L. et al. Mineralisation of 14C-labelled Polystyrene Plastics by Penicillium variabile After Ozonation Pre-treatment. N. Biotechnol. 5–9, http://dx.doi.org/10.1016/j.nbt.2016.07.008 (2016).
Oberbeckmann, S., Löder, M. G. J. & Labrenz, M. Marine microplastic-associated biofilms – A review. Environ. Chem. 551–562, doi:10.1071/EN15069 (2015).
Fazey, F. M. C. & Ryan, P. G. Biofouling on buoyant marine plastics: An experimental study into the effect of size on surface longevity. Environ. Pollut.
210, 354–360 (2016).
Artham, T. et al. Biofouling and stability of synthetic polymers in sea water. Int. Biodeterior. Biodegrad.
63, 884–890 (2009).
Krueger, M. C., Harms, H. & Schlosser, D. Prospects for microbiological solutions to environmental pollution with plastics. Appl. Microbiol. Biotechnol.
99, 8857–8874 (2015).
Shah, A. A., Hasan, F., Hameed, A. & Ahmed, S. Biological degradation of plastics: A comprehensive review. Biotechnol. Adv.
26, 246–265 (2008).
Ojeda, T. et al. Abiotic and biotic degradation of oxo-biodegradable foamed polystyrene. Polym. Degrad. Stab.
94, 2128–2133 (2009).
Mor, R. & Sivan, A. Biofilm formation and partial biodegradation of polystyrene by the actinomycete Rhodococcus ruber: Biodegradation of polystyrene. Biodegradation
19, 851–858 (2008).
Palacios, M., García, O. & Rodríguez-Hernández, J. Constructing robust and functional micropatterns on polystyrene surfaces by using deep UV irradiation. Langmuir
29, 2756–2763 (2013).
Hadad, D., Geresh, S. & Sivan, A. Biodegradation of polyethylene by the thermophilic bacterium Brevibacillus borstelensis. J. Appl. Microbiol.
98, 1093–1100 (2005).
Bonhomme, S. et al. Environmental biodegradation of polyethylene. Polym. Degrad. Stab.
81, 441–452 (2003).
Fontanella, S. et al. Comparison of the biodegradability of various polyethylene films containing pro-oxidant additives. Polym. Degrad. Stab.
95, 1011–1021 (2010).
Andrady, A. L. The plastic in microplastics: A review. Mar. Pollut. Bull.
119, 12–22 (2017).
Hibbing, M. E., Fuqua, C., Parsek, M. R. & Peterson, S. B. Bacterial competition: surviving and thriving in the microbial jungle. Nat. Rev. Microbiol.
8, 15–25 (2010).
Schluter, J., Nadell, C. D., Bassler, B. L. & Foster, K. R. Adhesion as a weapon in microbial competition. ISME J.
9, 139–49 (2015).
Chung, H. C. et al. Bacterial community succession and chemical profiles of subtidal biofilms in relation to larval settlement of the polychaete Hydroides elegans. ISME J.
4, 817–828 (2010).
Syranidou, E. et al. Development of tailored indigenous marine consortia for the degradation of naturally weathered polyethylene films. PlosOne
12, e0183984 (2017).
Briand, J.-F. et al. Pioneer marine biofilms on artificial surfaces including antifouling coatings immersed in two contrasting French Mediterranean coast sites. Biofouling
28, 453–63 (2012).
Salta, M., Wharton, J. A., Blache, Y., Stokes, K. R. & Briand, J. F. Marine biofilms on artificial surfaces: Structure and dynamics. Environ. Microbiol.
15, 2879–2893 (2013).
McCormick, A. R. et al. Microplastic in surface waters of urban rivers: concentration, sources, and associated bacterial assemblages. Ecosphere
7, e01556 (2016).
McCormick, A., Hoellein, T. J., Mason, S. A., Schluep, J. & Kelly, J. J. Microplastic is an abundant and distinct microbial habitat in an urban river. Environ. Sci. Technol.
48, 11863–11871 (2014).
Skariyachan, S. et al. Selection and screening of microbial consortia for efficient and ecofriendly degradation of plastic garbage collected from urban and rural areas of Bangalore, India. Environ. Monit. Assess.
187, 4174 (2015).
Kumar Sen, S. & Raut, S. Microbial degradation of low density polyethylene (LDPE): A review. J. Environ. Chem. Eng.
3, 462–473 (2015).
Acosta-González, A. & Marqués, S. Bacterial diversity in oil-polluted marine coastal sediments. Curr. Opin. Biotechnol.
38, 24–32 (2016).
Antoniou, E., Fodelianakis, S., Korkakaki, E. & Kalogerakis, N. Biosurfactant production from marine hydrocarbon-degrading consortia and pure bacterial strains using crude oil as carbon source. Front. Microbiol.
6, 1–14 (2015).
Ron, E. Z. & Rosenberg, E. Enhanced bioremediation of oil spills in the sea. Curr. Opin. Biotechnol.
27, 191–194 (2014).
Guibert, L. M. et al. Alkane Biodegradation Genes from Chronically Polluted Subantarctic Coastal Sediments and Their Shifts in Response to Oil Exposure. Microb. Ecol.
64, 605–616 (2012).
Cardinale, M. et al. Comparison of Different Primer Sets for Use in Automated Ribosomal Intergenic Spacer Analysis of Complex Bacterial Communities. Appl. Environ. Microbiol.
70, 6147–6156 (2004).
Perez-de-Mora, A., Engel, M. & Schloter, M. Abundance and Diversity of n-Alkane-Degrading Bacteria in a Forest Soil Co-Contaminated with Hydrocarbons and Metals: A Molecular Study on alkB Homologous Genes. Microb. Ecol.
62, 959–972 (2011).
Jin, C. E. & Kim, M. N. Change of bacterial community in oil-polluted soil after enrichment cultivation with low-molecular-weight polyethylene. Int. Biodeterior. Biodegradation
118, 27–33 (2017).
Langille, M. et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat. Biotechnol.
31, 814–21 (2013).
R Development Core Team. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing. In R Foundation for Statistical Computing (2009).
Ramette, A. Quantitative community fingerprinting methods for estimating the abundance of operational taxonomic units in natural microbial communities. Appl. Environ. Microbiol.
75, 2495–2505 (2009).
Masella, A. P., Bartram, A. K., Truszkowski, J. M., Brown, D. G. & Neufeld, J. D. PANDAseq: paired-end assembler for illumina sequences. BMC Bioinformatics
13, 31 (2012).
Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods
7, 335–336 (2010).
McMurdie, P. J. & Holmes, S. Phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data. PLoS One
8 (2013).
Segata, N. et al. Metagenomic biomarker discovery and explanation. Genome Biol.
12, R60 (2011).
Comments